EnhancerDB
  1. Home
  2. SNP
  3. rs71008173[chr1:19793552]
Enhancers that have rs71008173[chr1:19793552]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71008173[chr1:19793552]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19793550 19793565 FOXA1 JASPAR yes 27194504
chr1 19793551 19793563 FOXI1 JASPAR yes 27194505
chr1 19793551 19793565 POU4F1 JASPAR yes 27194506
chr1 19793551 19793566 FOXP1 JASPAR yes 27194507
chr1 19793551 19793566 HNF1A JASPAR yes 27194508
chr1 19793552 19793564 FOXC2 JASPAR yes 27194509
chr1 19793552 19793566 ONECUT2 JASPAR yes 27194510
chr1 19793552 19793566 ONECUT3 JASPAR yes 27194511
Genes associated with rs71008173[chr1:19793552], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More