EnhancerDB
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  3. rs71143216[chr17:56001473]
Enhancers that have rs71143216[chr17:56001473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71143216[chr17:56001473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56001462 56001475 ELF1 JASPAR yes 54999938
chr17 56001471 56001475 YY1 TRANSFAC yes 54999939
chr17 56001471 56001486 FOXP1 JASPAR yes 54999940
chr17 56001473 56001488 FOXP1 JASPAR yes 54999941
Genes associated with rs71143216[chr17:56001473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More