EnhancerDB
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  3. rs71172214[chr1:234880459]
Enhancers that have rs71172214[chr1:234880459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71172214[chr1:234880459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234878419 234883607 ZNF274 GTRD no Blood (GM12878) 107881636
chr1 234878974 234883568 ZNF274 GTRD no Blood (GM12878) 107881637
chr1 234878982 234883403 ZNF274 GTRD no Blood (GM12878) 107881638
chr1 234879051 234880925 ZNF274 GTRD no Bone Marrow (K562) 21397475
chr1 234880146 234880964 ZNF274 GTRD no Bone Marrow (K562) 21397482
chr1 234880307 234880957 ZNF274 GTRD no Bone Marrow (K562) 21397483
chr1 234880325 234881053 ZNF274 GTRD no Bone Marrow (K562) 21397484
chr1 234880441 234880462 IRF1 JASPAR yes 36310213
chr1 234880443 234880464 IRF1 JASPAR yes 36310216
chr1 234880445 234880460 STAT2 JASPAR yes 36310217
chr1 234880446 234880460 STAT1 JASPAR yes 36310218
chr1 234880447 234880461 IRF7 JASPAR yes 36310219
chr1 234880447 234880468 IRF1 JASPAR yes 36310220
chr1 234880448 234880463 FOXP1 JASPAR yes 36310221
chr1 234880448 234880469 IRF1 JASPAR yes 36310222
chr1 234880449 234880464 PRDM1 JASPAR yes 36310223
chr1 234880449 234880470 IRF1 JASPAR yes 36310224
chr1 234880453 234880474 IRF1 JASPAR yes 36310225
chr1 234880454 234880469 FOXP1 JASPAR yes 36310226
chr1 234880454 234880475 IRF1 JASPAR yes 36310227
chr1 234880456 234880471 FOXP1 JASPAR yes 36310228
chr1 234880457 234880813 ZNF274 GTRD no Bone Marrow (K562) 21397485
chr1 234880458 234880473 FOXP1 JASPAR yes 36310229
chr1 234880459 234880474 FOXP1 JASPAR yes 36310230
Genes associated with rs71172214[chr1:234880459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More