EnhancerDB
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  3. rs71173041[chr18:55930892]
Enhancers that have rs71173041[chr18:55930892]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55922865 55949275 enh17739
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs71173041[chr18:55930892]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55930883 55930897 SPIC JASPAR yes 110933645
chr18 55930886 55930907 IRF1 JASPAR yes 110933646
chr18 55930889 55930910 IRF1 JASPAR yes 110933647
chr18 55930890 55930911 IRF1 JASPAR yes 110933648
chr18 55930891 55930906 FOXP1 JASPAR yes 110933649
chr18 55930891 55930912 IRF1 JASPAR yes 110933650
chr18 55930892 55930907 FOXP1 JASPAR yes 110933651
chr18 55930892 55930913 IRF1 JASPAR yes 110933652
Genes associated with rs71173041[chr18:55930892], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More