EnhancerDB
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  3. rs71254294[chr16:11388434]
Enhancers that have rs71254294[chr16:11388434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs71254294[chr16:11388434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11388424 11388436 POU2F1 JASPAR yes 9502204
chr16 11388424 11388437 POU3F3 JASPAR yes 9502205
chr16 11388424 11388438 POU1F1 JASPAR yes 9502206
chr16 11388425 11388437 POU3F1 JASPAR yes 9502207
chr16 11388425 11388437 POU3F2 JASPAR yes 9502208
chr16 11388426 11388435 POU5F1B JASPAR yes 9502210
chr16 11388428 11388449 IRF1 JASPAR yes 9502211
chr16 11388429 11388450 IRF1 JASPAR yes 9502212
chr16 11388431 11388452 IRF1 JASPAR yes 9502213
chr16 11388432 11388453 IRF1 JASPAR yes 9502214
chr16 11388433 11388448 FOXP1 JASPAR yes 9502215
chr16 11388433 11388454 IRF1 JASPAR yes 9502216
chr16 11388434 11388449 FOXP1 JASPAR yes 9502217
chr16 11388434 11388455 IRF1 JASPAR yes 9502218
Genes associated with rs71254294[chr16:11388434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More