EnhancerDB
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  3. rs71278540[chr17:25657502]
Enhancers that have rs71278540[chr17:25657502]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71278540[chr17:25657502]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25657484 25657505 ZNF263 JASPAR yes 53620157
chr17 25657486 25657507 IRF1 JASPAR yes 53620158
chr17 25657487 25657502 FOXP1 JASPAR yes 53620159
chr17 25657488 25657503 STAT2 JASPAR yes 53620160
chr17 25657491 25657512 IRF1 JASPAR yes 53620161
chr17 25657492 25657513 IRF1 JASPAR yes 53620162
chr17 25657493 25657508 PRDM1 JASPAR yes 53620163
chr17 25657493 25657508 STAT2 JASPAR yes 53620164
chr17 25657494 25657508 SPIC JASPAR yes 53620165
chr17 25657494 25657508 STAT1 JASPAR yes 53620166
chr17 25657495 25657509 SPIC JASPAR yes 53620167
chr17 25657496 25657517 IRF1 JASPAR yes 53620168
chr17 25657497 25657518 IRF1 JASPAR yes 53620169
chr17 25657498 25657503 ETS2 TRANSFAC yes 53620170
chr17 25657498 25657519 IRF1 JASPAR yes 53620171
chr17 25657499 25657520 IRF1 JASPAR yes 53620172
chr17 25657500 25657515 FOXP1 JASPAR yes 53620173
chr17 25657500 25657521 IRF1 JASPAR yes 53620174
chr17 25657501 25657516 FOXP1 JASPAR yes 53620175
chr17 25657502 25657517 FOXP1 JASPAR yes 53620176
Genes associated with rs71278540[chr17:25657502], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More