EnhancerDB
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  3. rs71296839[chr2:232542322]
Enhancers that have rs71296839[chr2:232542322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71296839[chr2:232542322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232542316 232542337 IRF1 JASPAR yes 81735387
chr2 232542318 232542333 PRDM1 JASPAR yes 81735388
chr2 232542318 232542333 STAT2 JASPAR yes 81735389
chr2 232542321 232542336 FOXP1 JASPAR yes 81735390
chr2 232542322 232542337 FOXP1 JASPAR yes 81735391
Genes associated with rs71296839[chr2:232542322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More