EnhancerDB
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  3. rs71371970[chr17:42175877]
Enhancers that have rs71371970[chr17:42175877]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71371970[chr17:42175877]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42175873 42175878 SP1 TRANSFAC yes 54386823
chr17 42175874 42175879 SP1 TRANSFAC yes 54386824
chr17 42175877 42175882 SP1 TRANSFAC yes 54386825
Genes associated with rs71371970[chr17:42175877], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More