EnhancerDB
  1. Home
  2. SNP
  3. rs71382962[chr17:41479411]
Enhancers that have rs71382962[chr17:41479411]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71382962[chr17:41479411]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41478758 41479663 ZNF143 GTRD no Epithelial (MCF-7) 108261338
chr17 41478793 41479643 ZNF143 GTRD no Epithelial (MCF-7) 108261339
chr17 41478846 41479649 TCF7L2 GTRD no Colon (HCT116) 108261341
chr17 41479397 41479412 FOXA1 JASPAR yes 54342140
chr17 41479404 41479420 ZNF143 JASPAR yes 54342142
Genes associated with rs71382962[chr17:41479411], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More