EnhancerDB
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Enhancers that have rs71385946[chr17:76299597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76294130 76316355 enh17406
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71385946[chr17:76299597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76298580 76299942 ZNF143 GTRD no Epithelial (MCF-7) 21793125
chr17 76298620 76300075 ZNF274 GTRD no Bone Marrow (K562) 21793126
chr17 76298642 76299889 ZNF143 GTRD no Epithelial (MCF-7) 21793127
chr17 76298764 76299896 ZNF274 GTRD no Cervix (HeLa-S3) 21793128
chr17 76298772 76299764 ZNF274 GTRD no Bone Marrow (K562) 21793130
chr17 76298823 76299600 ZNF143 GTRD no Epithelial (MCF-7) 21793136
chr17 76298824 76299632 ZNF143 GTRD no Epithelial (MCF-7) 21793137
chr17 76298847 76299820 ZNF274 GTRD no Bone Marrow (K562) 21793142
chr17 76299277 76299684 ZNF274 GTRD no Cervix (HeLa-S3) 21793152
chr17 76299288 76299714 ZNF143 GTRD no Epithelial (MCF-7) 21793155
chr17 76299355 76299750 TCF7L2 GTRD no Colon (HCT116) 21793157
chr17 76299371 76299723 ZNF143 GTRD no Epithelial (MCF-7) 21793158
chr17 76299471 76299880 ZNF274 GTRD no Bone Marrow (K562) 21793159
chr17 76299592 76299610 NFYA JASPAR yes 56143890
chr17 76299596 76299600 H1TF2 TRANSFAC yes 56143891
chr17 76299596 76299600 NFE TRANSFAC yes 56143892
chr17 76299596 76299600 SRF TRANSFAC yes 56143893
Genes associated with rs71385946[chr17:76299597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More