EnhancerDB
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  3. rs71434058[chr12:65087194]
Enhancers that have rs71434058[chr12:65087194]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71434058[chr12:65087194]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65087182 65087203 IRF1 JASPAR yes 121427643
chr12 65087184 65087199 STAT2 JASPAR yes 121427644
chr12 65087188 65087209 IRF1 JASPAR yes 121427645
chr12 65087189 65087210 IRF1 JASPAR yes 121427646
chr12 65087191 65087212 IRF1 JASPAR yes 121427647
chr12 65087192 65087213 IRF1 JASPAR yes 121427648
chr12 65087193 65087208 FOXP1 JASPAR yes 121427649
chr12 65087194 65087209 FOXP1 JASPAR yes 121427650
Genes associated with rs71434058[chr12:65087194], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More