EnhancerDB
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  3. rs71540199[chr6:37113096]
Enhancers that have rs71540199[chr6:37113096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37090285 37118455 enh23203
Bone Marrow (K562) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71540199[chr6:37113096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37113084 37113099 FOXP1 JASPAR yes 101391908
chr6 37113085 37113100 FOXP1 JASPAR yes 101391909
chr6 37113085 37113106 IRF1 JASPAR yes 101391910
chr6 37113086 37113101 FOXP1 JASPAR yes 101391911
chr6 37113088 37113103 FOXP1 JASPAR yes 101391912
chr6 37113089 37113110 IRF1 JASPAR yes 101391913
chr6 37113090 37113105 FOXP1 JASPAR yes 101391914
chr6 37113090 37113111 IRF1 JASPAR yes 101391915
chr6 37113094 37113115 IRF1 JASPAR yes 101391916
chr6 37113095 37113110 FOXP1 JASPAR yes 101391917
chr6 37113095 37113116 IRF1 JASPAR yes 101391918
Genes associated with rs71540199[chr6:37113096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More