EnhancerDB
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  3. rs71554573[chr6:16342574]
Enhancers that have rs71554573[chr6:16342574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71554573[chr6:16342574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16342568 16342583 MEF2C JASPAR yes 100289827
chr6 16342572 16342578 TBP TRANSFAC yes 100289828
chr6 16342572 16342587 FOXP1 JASPAR yes 100289829
chr6 16342573 16342588 STAT2 JASPAR yes 100289830
chr6 16342574 16342589 FOXP1 JASPAR yes 100289831
chr6 16342574 16342595 IRF1 JASPAR yes 100289832
Genes associated with rs71554573[chr6:16342574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More