EnhancerDB
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  3. rs71562790[chr6:44033774]
Enhancers that have rs71562790[chr6:44033774]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 44033415 44033925 vista52055
VISTA
Transcript factors that have rs71562790[chr6:44033774]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44033762 44033775 NFKB1 JASPAR yes 70369253
chr6 44033762 44033775 NFKB2 JASPAR yes 70369254
chr6 44033762 44033775 NFKB1 JASPAR yes 101819778
chr6 44033762 44033775 NFKB2 JASPAR yes 101819779
chr6 44033763 44033774 NFKB1 JASPAR yes 70369257
chr6 44033763 44033774 NFKB1 JASPAR yes 101819782
chr6 44033764 44033781 BCL6B JASPAR yes 70369258
chr6 44033764 44033781 BCL6B JASPAR yes 101819783
chr6 44033766 44033781 TFAP2A JASPAR yes 70369259
chr6 44033766 44033781 TFAP2C JASPAR yes 70369260
chr6 44033766 44033781 TFAP2A JASPAR yes 101819784
chr6 44033766 44033781 TFAP2C JASPAR yes 101819785
chr6 44033768 44033783 TFAP2A JASPAR yes 70369261
chr6 44033768 44033783 TFAP2C JASPAR yes 70369262
chr6 44033768 44033783 TFAP2A JASPAR yes 101819786
chr6 44033768 44033783 TFAP2C JASPAR yes 101819787
chr6 44033769 44033781 TFAP2A JASPAR yes 70369263
chr6 44033769 44033781 TFAP2B JASPAR yes 70369264
chr6 44033769 44033781 TFAP2C JASPAR yes 70369265
chr6 44033769 44033781 TFAP2A JASPAR yes 101819788
chr6 44033769 44033781 TFAP2B JASPAR yes 101819789
chr6 44033769 44033781 TFAP2C JASPAR yes 101819790
Genes associated with rs71562790[chr6:44033774], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More