EnhancerDB
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  3. rs71577894[chr1:19754914]
Enhancers that have rs71577894[chr1:19754914]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71577894[chr1:19754914]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19754904 19754914 TCF4 JASPAR yes 27188890
chr1 19754905 19754914 SNAI2 JASPAR yes 27188891
chr1 19754909 19754924 MEF2C JASPAR yes 27188893
chr1 19754910 19754916 NFIC JASPAR yes 27188894
chr1 19754910 19754931 IRF1 JASPAR yes 27188895
chr1 19754913 19754928 FOXP1 JASPAR yes 27188896
chr1 19754914 19754935 IRF1 JASPAR yes 27188897
Genes associated with rs71577894[chr1:19754914], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More