EnhancerDB
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  3. rs71611196[chr5:173189289]
Enhancers that have rs71611196[chr5:173189289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71611196[chr5:173189289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173189277 173189297 RREB1 JASPAR yes 67901729
chr5 173189282 173189296 GLIS2 JASPAR yes 67901730
chr5 173189286 173189296 SP1 JASPAR yes 67901731
chr5 173189286 173189296 ZNF740 JASPAR yes 67901732
chr5 173189288 173189298 ZNF740 JASPAR yes 67901733
chr5 173189289 173189299 SP1 JASPAR yes 67901734
Genes associated with rs71611196[chr5:173189289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More