EnhancerDB
  1. Home
  2. SNP
  3. rs71646729[chr1:225800238]
Enhancers that have rs71646729[chr1:225800238]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs71646729[chr1:225800238]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225800222 225800238 SOX8 JASPAR yes 35755751
chr1 225800227 225800238 FOXH1 JASPAR yes 35755752
chr1 225800235 225800239 YY1 TRANSFAC yes 35755754
Genes associated with rs71646729[chr1:225800238], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More