EnhancerDB
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  3. rs71884399[chr17:49007900]
Enhancers that have rs71884399[chr17:49007900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71884399[chr17:49007900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49007882 49007903 IRF1 JASPAR yes 54735480
chr17 49007883 49007904 IRF1 JASPAR yes 54735482
chr17 49007883 49008580 ZNF274 GTRD no Liver (HepG2) 21771114
chr17 49007883 49008580 ZNF274 GTRD no Liver (HepG2) 108271911
chr17 49007884 49007905 IRF1 JASPAR yes 54735484
chr17 49007886 49007901 STAT2 JASPAR yes 54735485
chr17 49007887 49007901 STAT1 JASPAR yes 54735486
chr17 49007888 49007902 IRF7 JASPAR yes 54735487
chr17 49007888 49007909 IRF1 JASPAR yes 54735488
chr17 49007889 49007904 FOXP1 JASPAR yes 54735489
chr17 49007889 49007910 IRF1 JASPAR yes 54735490
chr17 49007890 49007905 PRDM1 JASPAR yes 54735491
chr17 49007890 49007911 IRF1 JASPAR yes 54735492
chr17 49007894 49007915 IRF1 JASPAR yes 54735493
chr17 49007895 49007910 FOXP1 JASPAR yes 54735494
chr17 49007897 49007912 FOXP1 JASPAR yes 54735495
chr17 49007899 49007914 FOXP1 JASPAR yes 54735496
chr17 49007900 49007915 FOXP1 JASPAR yes 54735497
Genes associated with rs71884399[chr17:49007900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More