EnhancerDB
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  3. rs7198515[chr16:85258387]
Enhancers that have rs7198515[chr16:85258387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7198515[chr16:85258387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85257855 85259434 ZNF143 GTRD no Epithelial (MCF-7) 21721558
chr16 85257967 85260329 TCF7L2 GTRD no Colon (HCT116) 21721559
chr16 85257969 85258965 ZNF143 GTRD no Epithelial (MCF-7) 21721560
chr16 85257974 85258707 ZNF274 GTRD no Bone Marrow (K562) 21721561
chr16 85258061 85259016 ZNF143 GTRD no Epithelial (MCF-7) 21721562
chr16 85258105 85260305 TCF7L2 GTRD no Colon (HCT116) 21721563
chr16 85258107 85260265 TCF7L2 GTRD no Colon (HCT116) 21721564
chr16 85258143 85260208 TCF7L2 GTRD no Colon (HCT116) 21721565
chr16 85258234 85260260 TCF7L2 GTRD no Colon (HCT116) 21721566
chr16 85258375 85258388 NR2F1 JASPAR yes 12035033
chr16 85258377 85258395 RARA JASPAR yes 12035035
Genes associated with rs7198515[chr16:85258387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More