EnhancerDB
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  3. rs7198780[chr16:85219938]
Enhancers that have rs7198780[chr16:85219938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7198780[chr16:85219938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85219078 85220948 ZNF143 GTRD no Epithelial (MCF-7) 21720572
chr16 85219228 85220950 ZNF143 GTRD no Epithelial (MCF-7) 21720573
chr16 85219284 85220792 ZNF143 GTRD no Epithelial (MCF-7) 21720574
chr16 85219365 85220968 ZNF143 GTRD no Epithelial (MCF-7) 21720575
chr16 85219371 85220804 ZNF143 GTRD no Epithelial (MCF-7) 21720576
chr16 85219373 85220976 ZNF143 GTRD no Epithelial (MCF-7) 21720577
chr16 85219408 85220930 ZNF274 GTRD no Liver (HepG2) 21720578
chr16 85219502 85220983 ZNF274 GTRD no Liver (HepG2) 21720579
chr16 85219531 85220942 ZNF143 GTRD no Epithelial (MCF-7) 21720580
chr16 85219535 85221509 ZNF143 GTRD no Epithelial (MCF-7) 21720581
chr16 85219578 85220940 ZNF143 GTRD no Epithelial (MCF-7) 21720582
chr16 85219630 85221039 ZNF143 GTRD no Epithelial (MCF-7) 21720584
chr16 85219717 85220972 ZNF143 GTRD no Epithelial (MCF-7) 21720585
chr16 85219725 85221344 TCF7L2 GTRD no Colon (HCT116) 21720586
chr16 85219744 85221698 ZNF143 GTRD no Epithelial (MCF-7) 21720587
chr16 85219832 85220943 ZBTB33 GTRD no Brain (SK-N-SH) 21720588
chr16 85219841 85220914 ZNF143 GTRD no Epithelial (MCF-7) 21720589
chr16 85219846 85220892 ZBTB33 GTRD no Brain (SK-N-SH) 21720590
chr16 85219852 85220940 ZBTB33 GTRD no Brain (SK-N-SH) 21720591
chr16 85219857 85221576 ZBTB33 GTRD no Brain (SK-N-SH) 21720592
chr16 85219867 85220893 ZNF143 GTRD no Epithelial (MCF-7) 21720593
chr16 85219880 85221314 TCF7L2 GTRD no Colon (HCT116) 21720594
chr16 85219913 85220650 ZNF143 GTRD no Epithelial (MCF-7) 21720595
chr16 85219922 85221401 TCF7L2 GTRD no Colon (HCT116) 21720596
Genes associated with rs7198780[chr16:85219938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More