EnhancerDB
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  3. rs7225774[chr17:80816907]
Enhancers that have rs7225774[chr17:80816907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs7225774[chr17:80816907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80815711 80818295 TCF7L2 GTRD no Colon (HCT116) 21800756
chr17 80815711 80818295 TCF7L2 GTRD no Colon (HCT116) 108312835
chr17 80815711 80818295 TCF7L2 GTRD no Colon (HCT116) 108312836
chr17 80816126 80818268 ZNF143 GTRD no Epithelial (MCF-7) 21800757
chr17 80816126 80818268 ZNF143 GTRD no Epithelial (MCF-7) 108312837
chr17 80816126 80818268 ZNF143 GTRD no Epithelial (MCF-7) 108312838
chr17 80816134 80818309 ZNF143 GTRD no Epithelial (MCF-7) 21800758
chr17 80816134 80818309 ZNF143 GTRD no Epithelial (MCF-7) 108312839
chr17 80816134 80818309 ZNF143 GTRD no Epithelial (MCF-7) 108312840
chr17 80816445 80817936 TCF7L2 GTRD no Colon (HCT116) 21800759
chr17 80816445 80817936 TCF7L2 GTRD no Colon (HCT116) 108312841
chr17 80816445 80817936 TCF7L2 GTRD no Colon (HCT116) 108312842
chr17 80816873 80818307 ZNF143 GTRD no Epithelial (MCF-7) 21800760
chr17 80816873 80818307 ZNF143 GTRD no Epithelial (MCF-7) 108312843
chr17 80816873 80818307 ZNF143 GTRD no Epithelial (MCF-7) 108312844
chr17 80816901 80816918 RARA JASPAR yes 56388655
Genes associated with rs7225774[chr17:80816907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More