EnhancerDB
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  3. rs72399586[chr17:56009474]
Enhancers that have rs72399586[chr17:56009474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72399586[chr17:56009474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56009465 56009480 FOXP1 JASPAR yes 55001069
chr17 56009465 56009485 RREB1 JASPAR yes 55001070
chr17 56009467 56009487 RREB1 JASPAR yes 55001071
chr17 56009471 56009491 RREB1 JASPAR yes 55001072
chr17 56009472 56009478 HiNF-A TRANSFAC yes 55001073
chr17 56009473 56009493 RREB1 JASPAR yes 55001074
Genes associated with rs72399586[chr17:56009474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More