EnhancerDB
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  3. rs72480301[chr1:168442761]
Enhancers that have rs72480301[chr1:168442761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs72480301[chr1:168442761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168442329 168443010 ZNF143 GTRD no Epithelial (MCF-7) 21348260
chr1 168442341 168442973 ZNF143 GTRD no Epithelial (MCF-7) 21348261
chr1 168442343 168443013 ZNF143 GTRD no Epithelial (MCF-7) 21348262
chr1 168442366 168443108 ZNF143 GTRD no Epithelial (MCF-7) 21348263
chr1 168442426 168442807 ZNF143 GTRD no Epithelial (MCF-7) 21348265
chr1 168442753 168442763 HOXC10 JASPAR yes 32929087
chr1 168442753 168442763 HOXD11 JASPAR yes 32929088
chr1 168442754 168442763 CDX1 JASPAR yes 32929089
chr1 168442754 168442765 CDX2 JASPAR yes 32929090
chr1 168442758 168442769 NFE2L2 JASPAR yes 32929091
Genes associated with rs72480301[chr1:168442761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More