EnhancerDB
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  3. rs72650493[chr1:24605339]
Enhancers that have rs72650493[chr1:24605339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs72650493[chr1:24605339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24605327 24605342 HNF4A JASPAR yes 27494848
chr1 24605336 24605355 REST JASPAR yes 27494849
chr1 24605338 24605353 TFAP2A JASPAR yes 27494850
chr1 24605338 24605353 TFAP2C JASPAR yes 27494851
Genes associated with rs72650493[chr1:24605339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More