EnhancerDB
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  3. rs72650498[chr1:24609472]
Enhancers that have rs72650498[chr1:24609472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs72650498[chr1:24609472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24609452 24609473 IRF1 JASPAR yes 27495440
chr1 24609456 24609474 IRF2 JASPAR yes 27495447
chr1 24609468 24609478 SP1 JASPAR yes 27495449
chr1 24609470 24609476 SP1 TRANSFAC yes 27495450
chr1 24609470 24609480 SP1 JASPAR yes 27495451
chr1 24609471 24609482 E2F6 JASPAR yes 27495452
Genes associated with rs72650498[chr1:24609472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More