EnhancerDB
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  3. rs72653931[chr1:19763085]
Enhancers that have rs72653931[chr1:19763085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72653931[chr1:19763085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19763073 19763086 EOMES JASPAR yes 27189986
chr1 19763075 19763085 TBR1 JASPAR yes 27189988
chr1 19763075 19763086 TBX20 JASPAR yes 27189989
chr1 19763075 19763086 TBX2 JASPAR yes 27189990
chr1 19763075 19763092 PAX1 JASPAR yes 27189991
chr1 19763075 19763095 TBX19 JASPAR yes 27189992
chr1 19763076 19763086 TBX21 JASPAR yes 27189993
chr1 19763077 19763085 MGA JASPAR yes 27189994
chr1 19763077 19763085 TBX15 JASPAR yes 27189995
chr1 19763077 19763085 TBX1 JASPAR yes 27189996
chr1 19763077 19763085 TBX4 JASPAR yes 27189997
chr1 19763077 19763085 TBX5 JASPAR yes 27189998
chr1 19763077 19763093 T JASPAR yes 27189999
Genes associated with rs72653931[chr1:19763085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More