EnhancerDB
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  3. rs72698128[chr1:154391819]
Enhancers that have rs72698128[chr1:154391819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154391539 154392211 vista3373
VISTA
Transcript factors that have rs72698128[chr1:154391819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 21340388
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 107832545
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 21340389
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 107832546
chr1 154390790 154392109 P63 GTRD no Skin (Keratinocyte) 21340390
chr1 154390790 154392109 P63 GTRD no Skin (Keratinocyte) 107832547
chr1 154390907 154391950 P63 GTRD no Skin (Keratinocyte) 21340391
chr1 154390907 154391950 P63 GTRD no Skin (Keratinocyte) 107832548
chr1 154391813 154391823 SREBF2 JASPAR yes 32290410
chr1 154391813 154391823 SREBF2 JASPAR yes 118372649
chr1 154391813 154391824 USF1 JASPAR yes 32290411
chr1 154391813 154391824 USF2 JASPAR yes 32290412
chr1 154391813 154391824 USF1 JASPAR yes 118372650
chr1 154391813 154391824 USF2 JASPAR yes 118372651
Genes associated with rs72698128[chr1:154391819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 154442248 154474589 - SHE ENSG00000169291.5 154474589 50429 Spleen 0.388134 1301