EnhancerDB
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  3. rs72709671[chr1:181069621]
Enhancers that have rs72709671[chr1:181069621]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72709671[chr1:181069621]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181069336 181069626 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21354370
chr1 181069336 181069626 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107848359
chr1 181069462 181070032 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21354371
chr1 181069462 181070032 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107848360
chr1 181069490 181069857 TCF7L2 GTRD no Colon (HCT116) 21354372
chr1 181069490 181069857 TCF7L2 GTRD no Colon (HCT116) 107848361
chr1 181069554 181070150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21354373
chr1 181069554 181070150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107848362
chr1 181069570 181070090 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21354374
chr1 181069570 181070090 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107848363
chr1 181069588 181069992 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354375
chr1 181069588 181069992 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848364
chr1 181069611 181069632 ZNF263 JASPAR yes 33552560
chr1 181069611 181069632 ZNF263 JASPAR yes 118407947
chr1 181069614 181069635 ZNF263 JASPAR yes 33552561
chr1 181069614 181069635 ZNF263 JASPAR yes 118407948
chr1 181069615 181069625 MZF1 JASPAR yes 33552562
chr1 181069615 181069625 MZF1 JASPAR yes 118407949
chr1 181069615 181069629 GLIS2 JASPAR yes 33552563
chr1 181069615 181069629 GLIS3 JASPAR yes 33552564
chr1 181069615 181069629 GLIS2 JASPAR yes 118407950
chr1 181069615 181069629 GLIS3 JASPAR yes 118407951
chr1 181069617 181069637 RREB1 JASPAR yes 33552565
chr1 181069617 181069637 RREB1 JASPAR yes 118407952
Genes associated with rs72709671[chr1:181069621], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 181057638 181059977 + IER5 ENSG00000162783.8 181057638 9644 Pancreas 0.375966 1625
chr1 180601140 180859387 + XPR1 ENSG00000143324.9 180601140 210234 Liver 0.271776 1620