EnhancerDB
  1. Home
  2. SNP
  3. rs72716276[chr1:171394406]
Enhancers that have rs72716276[chr1:171394406]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs72716276[chr1:171394406]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171392976 171394439 ZNF143 GTRD no Epithelial (MCF-7) 21349627
chr1 171393268 171394511 ZNF143 GTRD no Epithelial (MCF-7) 21349629
chr1 171393524 171394434 ZNF143 GTRD no Epithelial (MCF-7) 21349633
chr1 171394403 171394407 LFA1 TRANSFAC yes 33079098
Genes associated with rs72716276[chr1:171394406], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More