EnhancerDB
  1. Home
  2. SNP
  3. rs72827123[chr6:11205345]
Enhancers that have rs72827123[chr6:11205345]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72827123[chr6:11205345]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11205334 11205348 POU1F1 JASPAR yes 99863821
chr6 11205335 11205347 POU3F1 JASPAR yes 99863822
chr6 11205335 11205347 POU3F2 JASPAR yes 99863823
chr6 11205337 11205346 POU3F4 JASPAR yes 99863825
chr6 11205337 11205346 POU5F1B JASPAR yes 99863826
chr6 11205345 11205358 SMAD2 JASPAR yes 99863827
Genes associated with rs72827123[chr6:11205345], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More