EnhancerDB
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  3. rs72827146[chr6:11227233]
Enhancers that have rs72827146[chr6:11227233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72827146[chr6:11227233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11227215 11227235 RREB1 JASPAR yes 99867011
chr6 11227225 11227240 FOXP1 JASPAR yes 99867012
chr6 11227226 11227238 FOXC2 JASPAR yes 99867013
chr6 11227227 11227238 FOXC1 JASPAR yes 99867014
chr6 11227229 11227244 FOXP1 JASPAR yes 99867015
chr6 11227232 11227242 HOXD11 JASPAR yes 99867016
Genes associated with rs72827146[chr6:11227233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More