EnhancerDB
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  3. rs72840784[chr17:48967650]
Enhancers that have rs72840784[chr17:48967650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs72840784[chr17:48967650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48967328 48968125 TCF7L2 GTRD no Colon (HCT116) 21770279
chr17 48967635 48967653 NR3C1 JASPAR yes 54729653
chr17 48967646 48967661 HNF4G JASPAR yes 54729655
chr17 48967648 48967669 REST JASPAR yes 54729656
chr17 48967649 48967668 REST JASPAR yes 54729657
Genes associated with rs72840784[chr17:48967650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More