EnhancerDB
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  3. rs72855955[chr6:44056833]
Enhancers that have rs72855955[chr6:44056833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72855955[chr6:44056833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44056825 44056840 FOXP1 JASPAR yes 101822989
chr6 44056825 44056845 RREB1 JASPAR yes 101822990
chr6 44056825 44056846 IRF1 JASPAR yes 101822991
chr6 44056826 44056847 IRF1 JASPAR yes 101822992
chr6 44056827 44056847 RREB1 JASPAR yes 101822993
chr6 44056832 44056838 TCF4 TRANSFAC yes 101822994
chr6 44056832 44056847 FOXP1 JASPAR yes 101822995
chr6 44056832 44056852 RREB1 JASPAR yes 101822996
chr6 44056832 44056853 IRF1 JASPAR yes 101822997
Genes associated with rs72855955[chr6:44056833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More