EnhancerDB
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  3. rs72882778[chr1:27746181]
Enhancers that have rs72882778[chr1:27746181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72882778[chr1:27746181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27746172 27746183 HOXC13 JASPAR yes 27691569
chr1 27746173 27746183 HOXA13 JASPAR yes 27691570
chr1 27746173 27746183 HOXB13 JASPAR yes 27691571
chr1 27746173 27746183 HOXD13 JASPAR yes 27691572
chr1 27746175 27746181 TFIID TRANSFAC yes 27691575
Genes associated with rs72882778[chr1:27746181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More