EnhancerDB
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  3. rs72890939[chr1:32420664]
Enhancers that have rs72890939[chr1:32420664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 32415585 32431955 enh11723
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72890939[chr1:32420664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 32420651 32420665 STAT1 JASPAR yes 27967865
chr1 32420660 32420672 PKNOX1 JASPAR yes 27967866
chr1 32420660 32420672 PKNOX2 JASPAR yes 27967867
chr1 32420660 32420672 TGIF1 JASPAR yes 27967868
chr1 32420661 32420671 FIGLA JASPAR yes 27967869
chr1 32420661 32420671 ID4 JASPAR yes 27967870
chr1 32420661 32420671 MSC JASPAR yes 27967871
chr1 32420661 32420671 TCF3 JASPAR yes 27967872
chr1 32420661 32420671 TCF4 JASPAR yes 27967873
chr1 32420663 32420674 TBX2 JASPAR yes 27967874
chr1 32420663 32420676 EOMES JASPAR yes 27967875
chr1 32420664 32420672 TBX15 JASPAR yes 27967876
chr1 32420664 32420672 TBX1 JASPAR yes 27967877
chr1 32420664 32420672 TBX4 JASPAR yes 27967878
chr1 32420664 32420672 TBX5 JASPAR yes 27967879
chr1 32420664 32420674 TBR1 JASPAR yes 27967880
Genes associated with rs72890939[chr1:32420664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More