EnhancerDB
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  3. rs72900606[chr2:70359345]
Enhancers that have rs72900606[chr2:70359345]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70317005 70376348 enh5639
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72900606[chr2:70359345]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70359206 70360381 POLR2A UCSC Txn Factor no Conserved 107690711
chr2 70359334 70359345 FOXC1 JASPAR yes 74899156
chr2 70359334 70359346 FOXC2 JASPAR yes 74899157
chr2 70359335 70359347 FOXI1 JASPAR yes 74899158
chr2 70359337 70359345 FOXG1 JASPAR yes 74899161
chr2 70359342 70359346 YY1 TRANSFAC yes 74899162
Genes associated with rs72900606[chr2:70359345], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More