EnhancerDB
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  3. rs72924832[chr1:39657950]
Enhancers that have rs72924832[chr1:39657950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 39657786 39658129 vista1265
VISTA
Transcript factors that have rs72924832[chr1:39657950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39657321 39659049 ZNF274 GTRD no Bone Marrow (K562) 107802897
chr1 39657949 39657966 BCL6B JASPAR yes 28265272
chr1 39657949 39657966 BCL6B JASPAR yes 118275563
chr1 39657950 39657962 PKNOX2 JASPAR yes 28265273
chr1 39657950 39657962 TGIF1 JASPAR yes 28265274
chr1 39657950 39657962 TGIF2 JASPAR yes 28265275
chr1 39657950 39657962 PKNOX2 JASPAR yes 118275564
chr1 39657950 39657962 TGIF1 JASPAR yes 118275565
chr1 39657950 39657962 TGIF2 JASPAR yes 118275566
Genes associated with rs72924832[chr1:39657950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More