EnhancerDB
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  3. rs729341[chr5:172276614]
Enhancers that have rs729341[chr5:172276614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs729341[chr5:172276614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172276595 172276615 RREB1 JASPAR yes 67834439
chr5 172276610 172276623 EOMES JASPAR yes 67834440
chr5 172276612 172276616 ESR1 TRANSFAC yes 67834441
chr5 172276612 172276622 TBR1 JASPAR yes 67834442
chr5 172276613 172276623 TBX21 JASPAR yes 67834443
chr5 172276614 172276622 MGA JASPAR yes 67834444
chr5 172276614 172276622 TBX15 JASPAR yes 67834445
chr5 172276614 172276622 TBX1 JASPAR yes 67834446
chr5 172276614 172276622 TBX4 JASPAR yes 67834447
chr5 172276614 172276622 TBX5 JASPAR yes 67834448
chr5 172276614 172276623 ZEB1 JASPAR yes 67834449
Genes associated with rs729341[chr5:172276614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More