EnhancerDB
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  3. rs72961974[chr1:41878225]
Enhancers that have rs72961974[chr1:41878225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs72961974[chr1:41878225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41878219 41878233 GLIS3 JASPAR yes 28387060
chr1 41878220 41878229 NKX2-8 JASPAR yes 28387061
chr1 41878220 41878230 NKX2-3 JASPAR yes 28387062
Genes associated with rs72961974[chr1:41878225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More