EnhancerDB
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  3. rs72965258[chr1:19742395]
Enhancers that have rs72965258[chr1:19742395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72965258[chr1:19742395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19742390 19742407 PAX1 JASPAR yes 27187564
chr1 19742390 19742407 PAX9 JASPAR yes 27187565
chr1 19742391 19742405 PAX6 JASPAR yes 27187566
Genes associated with rs72965258[chr1:19742395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More