EnhancerDB
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  3. rs72990460[chr1:114352418]
Enhancers that have rs72990460[chr1:114352418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 114344579 114353639 enh12164
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Lung Lung (A549) Stomach Placenta Adrenal Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs72990460[chr1:114352418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 114352408 114352418 POU6F2 JASPAR yes 31653830
chr1 114352409 114352419 GSX1 JASPAR yes 31653831
chr1 114352409 114352419 GSX2 JASPAR yes 31653832
chr1 114352409 114352419 LHX2 JASPAR yes 31653833
chr1 114352409 114352419 MEOX1 JASPAR yes 31653834
chr1 114352409 114352419 MEOX2 JASPAR yes 31653835
chr1 114352409 114352419 MNX1 JASPAR yes 31653836
chr1 114352409 114352421 MEF2A JASPAR yes 31653837
chr1 114352409 114352421 MEF2B JASPAR yes 31653838
chr1 114352409 114352421 MEF2D JASPAR yes 31653839
chr1 114352409 114352425 POU4F2 JASPAR yes 31653840
chr1 114352409 114352425 POU4F3 JASPAR yes 31653841
chr1 114352410 114352418 LBX1 JASPAR yes 31653842
chr1 114352410 114352418 PDX1 JASPAR yes 31653843
chr1 114352410 114352418 VAX1 JASPAR yes 31653844
chr1 114352410 114352418 VAX2 JASPAR yes 31653845
chr1 114352410 114352418 VSX1 JASPAR yes 31653846
chr1 114352410 114352418 VSX2 JASPAR yes 31653847
chr1 114352410 114352420 MEF2A JASPAR yes 31653848
chr1 114352410 114352426 POU4F2 JASPAR yes 31653849
chr1 114352410 114352426 POU4F3 JASPAR yes 31653850
chr1 114352412 114352426 POU4F1 JASPAR yes 31653851
chr1 114352415 114352419 TEAD2 TRANSFAC yes 31653852
chr1 114352415 114352420 TBP TRANSFAC yes 31653853
chr1 114352415 114352421 TMF TRANSFAC yes 31653854
chr1 114352415 114352429 POU4F1 JASPAR yes 31653855
chr1 114352416 114352429 DUXA JASPAR yes 31653856
chr1 114352417 114352428 DUX4 JASPAR yes 31653857
chr1 114352417 114352428 PHOX2A JASPAR yes 31653858
chr1 114352417 114352428 PROP1 JASPAR yes 31653859
chr1 114352418 114352428 PAX3 JASPAR yes 31653860
chr1 114352418 114352428 PAX7 JASPAR yes 31653861
Genes associated with rs72990460[chr1:114352418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More