EnhancerDB
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  3. rs729990[chr1:33443266]
Enhancers that have rs729990[chr1:33443266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs729990[chr1:33443266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33442762 33444360 ZBTB33 GTRD no Brain (SK-N-SH) 21325328
chr1 33443246 33443267 ZNF263 JASPAR yes 28018207
chr1 33443248 33443268 RREB1 JASPAR yes 28018208
chr1 33443255 33443276 ZNF263 JASPAR yes 28018209
chr1 33443258 33443268 MZF1 JASPAR yes 28018210
chr1 33443261 33443266 TFAP2A TRANSFAC yes 28018211
chr1 33443261 33443267 MZF1 JASPAR yes 28018212
chr1 33443261 33443282 ZNF263 JASPAR yes 28018213
chr1 33443266 33443272 GATA3 JASPAR yes 28018214
Genes associated with rs729990[chr1:33443266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More