EnhancerDB
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  3. rs73038313[chr1:171405717]
Enhancers that have rs73038313[chr1:171405717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs73038313[chr1:171405717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171402799 171405826 ZNF143 GTRD no Epithelial (MCF-7) 21349656
chr1 171402799 171405826 ZNF143 GTRD no Epithelial (MCF-7) 107845400
chr1 171404597 171405826 ZBTB33 GTRD no Lung (A549) 21349689
chr1 171404597 171405826 ZBTB33 GTRD no Lung (A549) 107845401
chr1 171404629 171405736 ZBTB33 GTRD no Lung (A549) 21349690
chr1 171404629 171405736 ZBTB33 GTRD no Lung (A549) 107845403
chr1 171404733 171405720 ZNF143 GTRD no Epithelial (MCF-7) 21349693
chr1 171404733 171405720 ZNF143 GTRD no Epithelial (MCF-7) 107845407
chr1 171404807 171405775 ZNF274 GTRD no Cervix (HeLa-S3) 21349697
chr1 171404807 171405775 ZNF274 GTRD no Cervix (HeLa-S3) 107845414
chr1 171404915 171405738 ZNF274 GTRD no Liver (HepG2) 107845423
chr1 171405709 171405718 PITX3 JASPAR yes 33080811
chr1 171405710 171405718 RHOXF1 JASPAR yes 33080812
chr1 171405711 171405721 PAX3 JASPAR yes 33080813
chr1 171405711 171405721 PAX7 JASPAR yes 33080814
chr1 171405713 171405727 POU4F1 JASPAR yes 33080815
chr1 171405716 171405720 YY1 TRANSFAC yes 33080816
chr1 171405717 171405727 MNX1 JASPAR yes 33080817
chr1 171405717 171405727 POU6F1 JASPAR yes 33080818
Genes associated with rs73038313[chr1:171405717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More