EnhancerDB
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  3. rs73097407[chr12:52515962]
Enhancers that have rs73097407[chr12:52515962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs73097407[chr12:52515962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52515664 52517241 AR GTRD no Prostate (PC-3) 21546199
chr12 52515670 52515980 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546200
chr12 52515723 52515973 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546206
chr12 52515759 52515979 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546208
chr12 52515896 52516492 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546210
chr12 52515932 52516452 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546211
chr12 52515960 52515981 ZNF263 JASPAR yes 120919009
Genes associated with rs73097407[chr12:52515962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More