EnhancerDB
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  3. rs73109117[chr1:235115440]
Enhancers that have rs73109117[chr1:235115440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs73109117[chr1:235115440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235113519 235117302 POLR2A UCSC Txn Factor no Conserved 107885189
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402321
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885192
chr1 235115332 235115768 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402482
chr1 235115362 235115772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402483
chr1 235115362 235115798 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402484
chr1 235115370 235115760 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402485
chr1 235115394 235115830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402486
chr1 235115396 235115752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402487
chr1 235115419 235115799 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402488
chr1 235115426 235115442 NFYA JASPAR yes 36337688
chr1 235115435 235115455 PPARG JASPAR yes 36337692
chr1 235115438 235115453 ESR2 JASPAR yes 36337693
chr1 235115439 235115443 ESR1 TRANSFAC yes 36337694
chr1 235115439 235115450 USF1 JASPAR yes 36337695
chr1 235115439 235115450 USF2 JASPAR yes 36337696
chr1 235115440 235115447 USF2 TRANSFAC yes 36337697
Genes associated with rs73109117[chr1:235115440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More