EnhancerDB
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  3. rs73227542[chr12:125212787]
Enhancers that have rs73227542[chr12:125212787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs73227542[chr12:125212787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125212535 125212795 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582401
chr12 125212547 125212791 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582403
chr12 125212778 125212792 PLAG1 JASPAR yes 124414368
chr12 125212784 125212795 E2F1 JASPAR yes 124414369
chr12 125212785 125212796 E2F4 JASPAR yes 124414370
chr12 125212785 125212796 E2F6 JASPAR yes 124414371
Genes associated with rs73227542[chr12:125212787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More