EnhancerDB
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  3. rs73257934[chr16:85259933]
Enhancers that have rs73257934[chr16:85259933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs73257934[chr16:85259933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85257967 85260329 TCF7L2 GTRD no Colon (HCT116) 21721559
chr16 85258105 85260305 TCF7L2 GTRD no Colon (HCT116) 21721563
chr16 85258107 85260265 TCF7L2 GTRD no Colon (HCT116) 21721564
chr16 85258143 85260208 TCF7L2 GTRD no Colon (HCT116) 21721565
chr16 85258234 85260260 TCF7L2 GTRD no Colon (HCT116) 21721566
chr16 85258988 85260289 ZNF143 GTRD no Epithelial (MCF-7) 21721577
chr16 85259111 85260308 ZNF274 GTRD no Bone Marrow (K562) 21721578
chr16 85259371 85260295 ZNF143 GTRD no Epithelial (MCF-7) 21721580
chr16 85259405 85260196 ZBTB33 GTRD no Brain (SK-N-SH) 21721581
chr16 85259435 85260311 ZNF143 GTRD no Epithelial (MCF-7) 21721582
chr16 85259924 85259934 HOXC10 JASPAR yes 12035241
chr16 85259924 85259934 HOXD11 JASPAR yes 12035242
chr16 85259924 85259935 HOXA10 JASPAR yes 12035243
chr16 85259924 85259935 HOXC11 JASPAR yes 12035244
chr16 85259924 85259935 HOXC12 JASPAR yes 12035245
chr16 85259924 85259935 HOXC13 JASPAR yes 12035246
chr16 85259925 85259934 CDX1 JASPAR yes 12035247
chr16 85259925 85259936 CDX2 JASPAR yes 12035248
Genes associated with rs73257934[chr16:85259933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More