EnhancerDB
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  3. rs73257939[chr16:85265565]
Enhancers that have rs73257939[chr16:85265565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs73257939[chr16:85265565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85263906 85267681 ZNF143 GTRD no Epithelial (MCF-7) 21721707
chr16 85263906 85267681 ZNF143 GTRD no Epithelial (MCF-7) 108213547
chr16 85264114 85265617 ZNF143 GTRD no Epithelial (MCF-7) 21721709
chr16 85264114 85265617 ZNF143 GTRD no Epithelial (MCF-7) 108213549
chr16 85264476 85266112 ZNF274 GTRD no Bone Marrow (K562) 21721712
chr16 85264476 85266112 ZNF274 GTRD no Bone Marrow (K562) 108213552
chr16 85264639 85265638 ZNF274 GTRD no Bone Marrow (K562) 21721718
chr16 85265151 85265815 ZNF274 GTRD no Bone Marrow (K562) 21721722
chr16 85265194 85265756 TCF7L2 GTRD no Colon (HCT116) 21721723
chr16 85265217 85267637 TCF7L2 GTRD no Colon (HCT116) 21721724
chr16 85265447 85265891 ZNF274 GTRD no Bone Marrow (K562) 21721725
chr16 85265551 85266459 TCF7L2 GTRD no Colon (HCT116) 21721726
chr16 85265562 85265573 YY2 JASPAR yes 12036078
Genes associated with rs73257939[chr16:85265565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More