EnhancerDB
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  3. rs73319054[chr17:43248972]
Enhancers that have rs73319054[chr17:43248972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs73319054[chr17:43248972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43247783 43250788 POLR2A UCSC Txn Factor no Conserved 108263878
chr17 43248496 43248972 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763184
chr17 43248589 43249045 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763185
chr17 43248594 43248978 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763186
chr17 43248596 43248972 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763187
chr17 43248624 43249088 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763188
chr17 43248742 43249112 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763190
chr17 43248752 43249017 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763191
chr17 43248754 43249150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763192
chr17 43248761 43249021 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763193
chr17 43248793 43249153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763194
chr17 43248799 43249175 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763195
chr17 43248803 43249067 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763196
chr17 43248830 43249360 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763197
chr17 43248837 43248984 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763198
chr17 43248966 43249470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763199
chr17 43248967 43248987 RREB1 JASPAR yes 54432734
chr17 43248970 43248990 RREB1 JASPAR yes 54432735
chr17 43248970 43249620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763200
chr17 43248972 43248981 SP1 TRANSFAC yes 54432736
chr17 43248972 43248982 SP1 JASPAR yes 54432737
chr17 43248972 43248993 ZNF263 JASPAR yes 54432738
Genes associated with rs73319054[chr17:43248972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More