EnhancerDB
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  3. rs73413312[chr12:125208850]
Enhancers that have rs73413312[chr12:125208850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs73413312[chr12:125208850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125208691 125209750 ZNF143 GTRD no Epithelial (MCF-7) 21582342
chr12 125208733 125209055 TCF7L2 GTRD no Colon (HCT116) 21582343
chr12 125208816 125209311 SOX2 GTRD no Neural Stem Cells (H9) 21582344
chr12 125208837 125208855 IRF2 JASPAR yes 124413793
chr12 125208837 125209656 TCF7L2 GTRD no Colon (HCT116) 21582345
chr12 125208838 125208859 IRF1 JASPAR yes 124413794
chr12 125208840 125208855 PRDM1 JASPAR yes 124413795
chr12 125208841 125208855 SPIC JASPAR yes 124413796
Genes associated with rs73413312[chr12:125208850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More